Link: https://genome.ucsc.edu/
Description: WEBGenome Browser - Interactively visualize genomic data. BLAT - Rapidly align sequences to the genome. In-Silico PCR - Rapidly align PCR primer pairs to the genome. Table Browser - Download and filter data from the Genome Browser. LiftOver - Convert genome coordinates between assemblies.
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Link: http://www.sciencelikes.org/
Description: WEBWelcome to the UCSC Genome Browser website. This site contains the reference sequence and working draft assemblies for a large collection of genomes. It also provides portals to ENCODE data at UCSC (2003 to 2012) and to the Neandertal project.
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Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7779060/
Description: WEBJan 1, 2021 · For more than two decades, the UCSC Genome Browser database (https://genome.ucsc.edu) has provided high-quality genomics data visualization and genome annotations to the research community. As the field of genomics grows and more data become available, new modes of display are required to accommodate new …
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Link: https://en.wikipedia.org/wiki/UCSC_Genome_Browser
Description: WEBThe UCSC Genome Browser is an online and downloadable genome browser hosted by the University of California, Santa Cruz (UCSC). It is an interactive website offering access to genome sequence data from a variety of vertebrate and invertebrate species and major model organisms, integrated
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Link: https://www.genome.ucsc.edu/training/vids/
Description: WEBUCSC Genome Browser training videos. Home; Genomes. Human GRCh38/hg38; Human GRCh37/hg19; Human T2T-CHM13/hs1; Mouse GRCm39/mm39; Mouse GRCm38/mm10; Genome Archive GenArk; SARS-CoV-2 (COVID-19) Other; Genome Browser. Back to Genome Browser; Configure; Track Search; Short Exact DNA Match; Reset All User …
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Link: https://genome.ucsc.edu/blog/
Description: WEBWhen present in UCSC’s GenArk collection, these genome browsers can be loaded instantly with direct links (e.g., http://genome.ucsc.edu/h/GCF_001984765.1), and they come ready with dynamically invoked BLAT and PCR servers, enabling searching for sequences and primers.
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Link: https://genomics.ucsc.edu/2014/01/17/guide-to-the-ucsc-genome-browser/
Description: WEBJan 17, 2014 · This tutorial is aimed at the biologist who is interested in exploring protein-coding genes using the University of California Santa Cruz (UCSC) Genome Browser. It is geared towards those who have little or no experience using the UCSC Genome Browser and for more advanced users who are not familiar with many of the gene-oriented …
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Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3603215/
Description: WEBAug 18, 2012 · The UCSC Genome Browser (http://genome.ucsc.edu) is a graphical viewer for genomic data now in its 13th year. Since the early days of the Human Genome Project, it has presented an integrated view of genomic data of many kinds.
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Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8016453/
Description: WEBThe UCSC Genome Browser for SARS-CoV-2 ( https://genome.ucsc.edu/covid19.html) provides continuously updated access to the mutations in the many thousands of SARS-CoV-2 genomes deposited in GISAID and the international nucleotide sequencing databases, displayed alongside phylogenetic trees.
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Link: https://genome.cse.ucsc.edu/cgi-bin/hgGateway
Description: WEBGenome Data; Source Code; Genome Browser Store; Utilities; FTP; MySQL Access; Cloud Access; REST API; My Data. Custom Tracks; My Sessions; Track Hubs; Track Collection Builder; Public Sessions; Projects. Genotype Tissue Expression (GTEx) Encyclopedia of DNA Elements (ENCODE) UCSC Cell Browser; UCSC COVID-19 Research; Help. …
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