Link: https://xena.ucsc.edu/
Description: WebUCSC Xena. See the bigger picture. An online exploration tool for public and private, multi-omic and clinical/phenotype data. Launch Xena. Tutorials and walkthroughs. Don't know where to start? Jump in with one of our tutorials or "How do I …" walkthroughs. Tutorials. Explore TCGA, GDC, and other public cancer genomics resources.
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Link: https://xena.ucsc.edu/public/
Description: WebMar 6, 2019 · We provide interactive online visualization of seminal cancer genomics datasets, including data from The Cancer Genome Atlas (TCGA), International Cancer Genome Consortium (ICGC), and Genomic Data Commons (GDC). We also visualize the UCSC RNA-seq compendium which contains data from TCGA tumor samples, TCGA normal samples, and GTEx normal samples.
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Link: http://xena.ucsc.edu/welcome-to-ucsc-xena/
Description: WebMar 6, 2019 · Welcome to the next generation UCSC Cancer Browser: UCSC Xena! UCSC Xena has all the same functionality of the UCSC Cancer Browser plus new tools, such as the ability to see multiple types/modes of genomic data side-by-side, and plenty of new data, such as the latest from the GDC, GTEx and more.
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Link: https://www.nature.com/articles/s41587-020-0546-8
Description: WebMay 22, 2020 · UCSC Xena was developed as a high-performance visualization and analysis tool for both large public repositories and private datasets. It was built to scale with the current and future data...
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Link: https://genomics.ucsc.edu/2017/04/24/xena/
Description: WebApr 24, 2017 · UCSC Xena is a bioinformatics tool to visualize functional genomics data from multiple sources simultaneously, including both public and private data. The Xena system consists of a set of federated data hubs and the Xena browser, which integrates across hubs, providing one location to analyze and visualize all data.
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Link: http://xena.ucsc.edu/getting-started/
Description: WebFeb 26, 2019 · Getting Started. Mary Goldman26 February 2019. Check out our tutorials. Improve this page.
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Link: https://www.nature.com/articles/s41467-020-16785-6
Description: WebJul 7, 2020 · UCSC Xena is best for integrating diverse PCAWG data types, including simple mutations, gene expression levels, and gene fusions, as well as less common types such as alternative splicing 1 events ...
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Link: https://xena.ucsc.edu/private-hubs/
Description: WebFeb 26, 2019 · UCSC Xena. View your own private data, or data from a paper. Mary Goldman26 February 2019. View your data, securely and privately. Our step-by-step wizard will guide you whether you're on a Windows or Mac computer. Viewing your data, securely and privately, is easy with Xena. Your data stays …
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Link: https://xena.ucsc.edu/discover-relationships/
Description: WebFeb 26, 2019 · Easily compare any -omic data within a gene or transcript, or across different genes. Our visualizations are designed to offer incredible flexibility, allowing you to see exactly the data you want to see. Use Xena to find and show patterns between genes or between genomic and phenotype information.
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Link: https://ucsc-xena.gitbook.io/project
Description: WebLast updated 1 year ago. Tutorials, Live Examples, and How to pages for UCSC Xena.
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